Thu, 25 Feb 2021 05:44:29 UTC

Information for build R-qtl-1.16.6-1.fc11

ID177719
Package NameR-qtl
Version1.16.6
Release1.fc11
Epoch
SummaryTools for analyzing QTL experiments
DescriptionR-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
Built byellert
State complete
Volume fedora_koji_archive00
StartedFri, 11 Jun 2010 10:39:42 UTC
CompletedFri, 11 Jun 2010 10:45:45 UTC
Taskbuild (dist-f11-updates-candidate, /cvs/pkgs:rpms/R-qtl/F-11:R-qtl-1_16_6-1_fc11)
Tags
dist-f11-updates
RPMs
src
R-qtl-1.16.6-1.fc11.src.rpm (info) (download)
i586
R-qtl-1.16.6-1.fc11.i586.rpm (info) (download)
R-qtl-debuginfo-1.16.6-1.fc11.i586.rpm (info) (download)
ppc
R-qtl-1.16.6-1.fc11.ppc.rpm (info) (download)
R-qtl-debuginfo-1.16.6-1.fc11.ppc.rpm (info) (download)
ppc64
R-qtl-1.16.6-1.fc11.ppc64.rpm (info) (download)
R-qtl-debuginfo-1.16.6-1.fc11.ppc64.rpm (info) (download)
x86_64
R-qtl-1.16.6-1.fc11.x86_64.rpm (info) (download)
R-qtl-debuginfo-1.16.6-1.fc11.x86_64.rpm (info) (download)
Logs
i586
build.log
root.log
state.log
ppc
build.log
root.log
state.log
ppc64
build.log
root.log
state.log
x86_64
build.log
root.log
state.log
Changelog * Fri Jun 11 2010 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.16.6-1 - New upstream release * Sun Nov 22 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.14.2-2 - Modify build for R 2.10 and higher - remove scriptlets * Wed Oct 07 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.14.2-1 - New upstream release - Disable the check since it trips on a missing suggested package - Change license tag to GPLv3 to reflect an upstream license change * Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.11-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild * Sat May 23 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.11-1 - New upstream release * Wed Mar 18 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.10-2 - Update package summary and description - Change defines to globals * Sat Feb 28 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.10-1 - Updated to new upstream version - contains consistent licensing information - Reverted License tag from GPLv2 to GPLv2+ to reflect the new information * Tue Dec 02 2008 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.09-2 - Corrected License tag from GPLv2+ to GPLv2 * Wed Nov 05 2008 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.09-1 - Initial package creation