Sun, 22 May 2022 10:05:26 UTC

Information for build R-qtl-1.38.4-1.fc23

ID734508
Package NameR-qtl
Version1.38.4
Release1.fc23
Epoch
SummaryTools for analyzing QTL experiments
DescriptionR-qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental crosses. Our goal is to make complex QTL mapping methods widely accessible and allow users to focus on modeling rather than computing. A key component of computational methods for QTL mapping is the hidden Markov model (HMM) technology for dealing with missing genotype data. We have implemented the main HMM algorithms, with allowance for the presence of genotyping errors, for backcrosses, intercrosses, and phase-known four-way crosses. The current version of R-qtl includes facilities for estimating genetic maps, identifying genotyping errors, and performing single-QTL genome scans and two-QTL, two-dimensional genome scans, by interval mapping (with the EM algorithm), Haley-Knott regression, and multiple imputation. All of this may be done in the presence of covariates (such as sex, age or treatment). One may also fit higher-order QTL models by multiple imputation and Haley-Knott regression.
Built byellert
State complete
Volume fedora_koji_archive01
StartedTue, 09 Feb 2016 15:01:20 UTC
CompletedTue, 09 Feb 2016 15:31:05 UTC
Taskbuild (f23-candidate, /R-qtl:5244c6ea06c139e5fb6cd8a1ae1ff0c776603383)
Tags
f23-updates
RPMs
src
R-qtl-1.38.4-1.fc23.src.rpm (info) (download)
armv7hl
R-qtl-1.38.4-1.fc23.armv7hl.rpm (info) (download)
R-qtl-debuginfo-1.38.4-1.fc23.armv7hl.rpm (info) (download)
i686
R-qtl-1.38.4-1.fc23.i686.rpm (info) (download)
R-qtl-debuginfo-1.38.4-1.fc23.i686.rpm (info) (download)
x86_64
R-qtl-1.38.4-1.fc23.x86_64.rpm (info) (download)
R-qtl-debuginfo-1.38.4-1.fc23.x86_64.rpm (info) (download)
Logs
armv7hl
root.log
state.log
build.log
x86_64
build.log
state.log
root.log
i686
build.log
root.log
state.log
Changelog * Tue Feb 09 2016 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.38.4-1 - Update to 1.37.4 - Use license tag in files section * Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 1.37.11-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Tue Sep 08 2015 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.37.11-1 - Update to 1.37.11 * Tue Jun 16 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.36.6-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 1.36.6-2 - Rebuilt for GCC 5 C++11 ABI change * Fri Mar 06 2015 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.36.6-1 - Update to 1.36.6 * Sun Jan 04 2015 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.35.3-1 - Update to 1.35.3 * Mon Oct 13 2014 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.33.7-1 - Update to 1.33.7 * Fri Aug 15 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.32.10-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild * Thu Jul 17 2014 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.32.10-4 - Remove stack limit workaround (bug fixed in R 3.1.1) * Tue Jul 01 2014 Jakub ńĆajka <jcajka@redhat.com> - 1.32.10-3 - Changed stack limit on ppc64 and s390x to allow checks to pass * Sat Jun 28 2014 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.32.10-2 - Disable checks on ppc64 * Wed Jun 25 2014 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.32.10-1 - Update to 1.32.10 - Use R-core-devel instead of R-devel as BR - Re-enable checks * Fri Jun 06 2014 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.31.9-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild * Thu May 08 2014 Tom Callaway <spot@fedoraproject.org> - 1.31.9-1 - Update to 1.31.9 * Sat Dec 21 2013 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.29.2-1 - Update to 1.29.2 - Add BR for blas-devel and lapack-devel * Tue Oct 15 2013 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.28.19-1 - Update to 1.28.19 * Fri Aug 02 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.27.10-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild * Wed Apr 17 2013 Tom Callaway <spot@fedoraproject.org> - 1.27.10-2 - rebuild for R3 * Thu Apr 11 2013 Pierre-Yves Chibon <pingou@pingoured.fr> - 1.27.10-1 - Update to 1.27.10 * Thu Apr 11 2013 Tom Callaway <spot@fedoraproject.org> - 1.26.14-3 - rebuild for R3 * Wed Feb 13 2013 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.26.14-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild * Tue Dec 11 2012 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.26.14-1 - New upstream release * Tue Nov 13 2012 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.25.15-1 - New upstream release * Wed Jul 18 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.23.16-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild * Fri Mar 23 2012 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.23.16-1 - New upstream release * Thu Jan 12 2012 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.21-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild * Fri Dec 02 2011 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.22.21-1 - New upstream release * Tue Nov 08 2011 Tom Callaway <spot@fedoraproject.org> - 1.21.2-2 - rebuild for R 2.14.0 * Wed Jun 29 2011 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.21.2-1 - New upstream release * Mon Feb 07 2011 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.19.20-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_15_Mass_Rebuild * Wed Jan 19 2011 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.19.20-1 - New upstream release * Thu Sep 02 2010 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.18.7-1 - New upstream release * Fri Jun 11 2010 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.16.6-1 - New upstream release * Sun Nov 22 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.14.2-2 - Modify build for R 2.10 and higher - remove scriptlets * Wed Oct 07 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.14.2-1 - New upstream release - Disable the check since it trips on a missing suggested package - Change license tag to GPLv3 to reflect an upstream license change * Fri Jul 24 2009 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.11-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_12_Mass_Rebuild * Sat May 23 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.11-1 - New upstream release * Wed Mar 18 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.10-2 - Update package summary and description - Change defines to globals * Sat Feb 28 2009 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.10-1 - Updated to new upstream version - contains consistent licensing information - Reverted License tag from GPLv2 to GPLv2+ to reflect the new information * Tue Dec 02 2008 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.09-2 - Corrected License tag from GPLv2+ to GPLv2 * Wed Nov 05 2008 Mattias Ellert <mattias.ellert@fysast.uu.se> - 1.09-1 - Initial package creation